VU Gyvybės mokslų centro autoriaus 'Marijonas Tutkus' publikacijų sąrašas

2024
1 Gelžinis, Andrius; Chmeliov, Jevgenij; Tutkus, Marijonas; Vitulskienė, Ernesta; Franckevičius, Marius; Büchel, Claudia; Robert, Bruno; Valkūnas, Leonas. Fluorescence quenching in aggregates of fucoxanthin–chlorophyll protein complexes: Interplay of fluorescing and dark states // Biochimica et biophysica acta (BBA) - Bioenergetics. Amsterdam : Elsevier BV. ISSN 0005-2728. 2024, vol. 1865, iss. 2, art. no. 149030, p. 1-10. DOI: 10.1016/j.bbabio.2023.149030. [DB: Science Citation Index Expanded (Web of Science), Scopus]
2 Tutkus, Marijonas; Lundgaard, Christian V.; Veshaguri, Salome; Tønnesen, Asger; Hatzakis, Nikos; Rasmussen, Søren G. F.; Stamou, Dimitrios. Probing activation and conformational dynamics of the vesicle-reconstituted β2 adrenergic receptor at the single-molecule level // Journal of physical chemistry B. Washington : American chemical society (ACS). ISSN 1520-6106. eISSN 1520-5207. 2024, vol. 128, iss. 9, p. 2124-2133. DOI: 10.1021/acs.jpcb.3c08349.s001. [DB: Scopus, Science Citation Index Expanded (Web of Science)]

2023
1 Tutkus, Marijonas; Alsamsam, Mohammad Nour; Kopūstas, Aurimas; Paksaitė, J.; Jurevičiūtė, M. Affordable and practical super-resolution microscopy system for single-particle tracking, including hardware and software, designed for bench-top use // 12th single molecule localization microscopy symposium (SMLMS 2023), 28 - 30 August 2023, Vienna, Austria. Vienna. 2023, P097, p. 151. Prieiga per internetą: <https://smlms.org/> [žiūrėta 2023-09-11].
2 Kopūstas, Aurimas; Mazerimas, M.; Jurevičiūtė, M.; Alsamsam, Mohammad Nour; Paksaitė, J.; Budvytytė, Rima; Zaremba, Mindaugas; Tutkus, Marijonas. Characterization and improvement of modified glass surface functional and passivating properties for efficient single-molecule fluorescence imaging // 12th single molecule localization microscopy symposium (SMLMS 2023), 28 - 30 August 2023, Vienna, Austria. Vienna. 2023, P041, p. 97. Prieiga per internetą: <https://smlms.org/> [žiūrėta 2023-09-11].
3 Tutkus, Marijonas; Alsamsam, Mohammad Nour; Kopūstas, Aurimas; Jurevičiūtė, Meda; Paksaitė, Justė. Super-resolution microscopy system for single-particle tracking, including hardware and software, designed for bench-top use // EMBO | EMBL Symposium: Seeing is believing: imaging the molecular processes of life EMBL Advanced Training Centre, 04 - 07 Oct 2023, | EMBL Heidelberg and virtual : abstracts. 2023, p. 80.
4 Ivanovaitė, Šarūnė; Paksaitė, Justė; Kopūstas, Aurimas; Karzaitė, Giedrė; Rutkauskas, Danielis; Šilanskas, Arūnas; Sasnauskas, Giedrius; Zaremba, Mindaugas; Jones, Stephen K.; Tutkus, Marijonas. smFRET detection of cis and trans DNA interactions by the BfiI restriction endonuclease // Journal of physical chemistry B. Washington : American Chemical Society (ACS). ISSN 1520-6106. eISSN 1520-5207. 2023, vol. 127, no. 29, p. 6470-6478. DOI: 10.1021/acs.jpcb.3c03269.s001. [DB: Science Citation Index Expanded (Web of Science), Scopus]
5 Alsamsam, Mohammad Nour; Kopūstas, Aurimas; Jurevičiūtė, Meda; Tutkus, Marijonas. The miEye: bench-top super-resolution microscope with cost-effective equipment // Open readings 2023: 66th international conference for students of physics and natural sciences, April 18-21, 2023, Vilnius, Lithuania: annual abstract book / editors: M. Keršys, Š. Mickus. Vilnius : Vilnius University Press, 2023. eISBN 9786090708835. p. 79. (Vilnius University Proceedings, eISSN 2669-0233 ; vol. 34). DOI: 10.15388/IOR2023. [DB: Dimensions]

2022
1 Damalas, Alexandros; Vonkova, Ivana; Tutkus, Marijonas; Stamou, Dimitrios. TGFβ-induced changes in membrane curvature influence Ras oncoprotein membrane localization // Scientific reports. Berlin : Springer Science and Business Media LLC. ISSN 2045-2322. eISSN 2045-2322. 2022, vol. 12, art. no. 13486, p. 1-11. DOI: 10.1038/s41598-022-17482-8. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 4.600; AIF: 7.200; Q2 (2022 InCities JCR SCIE)]
2 Tutkus, Marijonas; Alsamsam, Mohammad Nour; Kopūstas, Aurimas; Jurevičiūtė, Meda. Super-resolution microscopy for DNA-protein interaction studies in vivo and in vitro // (SMLMS2022) 11th single molecule localization microscopy symposium: monday 29th August – wednesday 31st 2022, Institut Langevin, Paris: Program. Paris. 2022, art. no. 143, p. 1. Prieiga per internetą: <https://smlms.org/program/> [žiūrėta 2022-09-08].
3 Kupčinskaitė, Eglė; Tutkus, Marijonas; Kopūstas, Aurimas; Ašmontas, Simonas Vytautas; Jankunec, Marija; Zaremba, Mindaugas; Tamulaitienė, Giedrė; Šinkūnas, Tomas. Disarming of type I-F CRISPR-Cas surveillance complex by anti-CRISPR proteins AcrIF6 and AcrIF9 // Scientific reports : Springer Science and Business Media LLC. ISSN 2045-2322. eISSN 2045-2322. 2022, vol. 12, art. no. 15548, p. 1-14. DOI: 10.1038/s41598-022-19797-y. [DB: Scopus, Science Citation Index Expanded (Web of Science)] [IF: 4.600; AIF: 7.200; Q2 (2022 InCities JCR SCIE)]
4 Kopūstas, Aurimas; Zaremba, Mindaugas; Tutkus, Marijonas. DNA flow-stretch assays for studies of protein-DNA interactions at the single-molecule level // Applied nano. Basel : MDPI AG. eISSN 2673-3501. 2022, vol. 3, iss. 1, p. 16-41. DOI: 10.3390/applnano3010002. [DB: DOAJ]
5 Kopūstas, Aurimas; Alsamsam, Mohammad Nour; Jurevičiūtė, Meda; Paksaitė, Justė; Tutkus, Marijonas. Fluorescence microscopy-based studies of individual protein-DNA interactions in vitro vs. in vivo: challenges, solutions and outcomes // BBC-2022 : 3rd International conference baltic biophysics conference; 2022, October 6-7, Center for Physical Sciences and Technology, Vilnius, Lithuania, abstract book. Vilnius. 2022, O15, p. 34. Prieiga per internetą: <https://bbc.lbfd.lt/about-the-event/> [žiūrėta 2022-11-14].
6 Alsamsam, Mohammad Nour; Kopūstas, Aurimas; Jurevičiūtė, Meda; Tutkus, Marijonas. The miEye: bench-top super-resolution microscope with cost-effective equipment // HardwareX. Amsterdam : Elsevier. eISSN 2468-0672. 2022, vol. 12, art. no. e00368, p. [1-33]. DOI: 10.1016/j.ohx.2022.e00368. [DB: Emerging Sources Citation Index (Web of Science), Scopus, MEDLINE]

2021
1 Kopūstas, Aurimas; Rakickas, Tomas; Paksaitė, Justė; Pocevičiūtė, Ernesta; Karvelis, Tautvydas; Zaremba, Mindaugas; Manakova, Elena; Tutkus, Marijonas. Soft DNA Curtains: high-throughput SM biophysics method to investigate protein-DNA interaction // 13th EBSA European biophysics congress, Vienna (Austria), July 24–28, 2021. Vienna. 2021, P-354, p. 190.
2 Kopūstas, Aurimas; Rakickas, Tomas; Paksaitė, Justė; Pocevičiūtė, Ernesta; Karvelis, Tautvydas; Zaremba, Mindaugas; Manakova, Elena; Tutkus, Marijonas. Soft DNA Curtains platform for single-molecule level DNA-protein interaction studies // 13 th EBSA European biophysics congress, Vienna (Austria), July 24–28, 2021. Vienna. 2021, P-355, p. 191.
3 Alsamsam, Mohammad Nour; Kopūstas, Aurimas; Ašmontas, Simonas Vytautas; Tutkus, Marijonas. Cost-effective super-resolution single-molecule localization microscope with industry-grade CMOS and automatic focus stabilization // Seeing is believing - imaging the molecular processes of life : EMBO | EMBL Symposium, (05 - 08 October 2021, Virtual). 2021, p. [1].
4 Kopūstas, Aurimas; Karvelis, Tautvydas; Manakova, Elena; Paksaitė, Justė; Pocevičiūtė, Ernesta; Rakickas, Tomas; Zaremba, Mindaugas; Tutkus, Marijonas. Soft DNA Curtains: High-throughput SM biophysics method to investigate the binding of proteins to DNA // EMBO | EMBL Symposium : Seeing is believing: imaging the molecular processes of life: 5-8 October 2021, virtual conference. 2021, p. 1-3. Prieiga per internetą: <https://www.embl.org/about/info/course-and-conference-office/events/ees21-10/> [žiūrėta 2022-09-27].
5 Rakickas, Tomas; Paksaitė, Justė; Pocevičiūtė, Ernesta; Karvelis, Tautvydas; Zaremba, Mindaugas; Manakova, Elena; Tutkus, Marijonas; Kopūstas, Aurimas. Soft DNA Curtains fabrication and application to protein binding studies // EMBO | EMBL Symposium : Seeing is believing: imaging the molecular processes of life: 5-8 October 2021, virtual conference. 2021, p. 1-3. Prieiga per internetą: <https://www.embl.org/about/info/course-and-conference-office/events/ees21-10/> [žiūrėta 2022-09-27].
6 Kopūstas, Aurimas; Ivanovaitė, Šarūnė; Rakickas, Tomas; Pocevičiūtė, Ernesta; Paksaitė, Justė; Karvelis, Tautvydas; Zaremba, Mindaugas; Manakova, Elena; Tutkus, Marijonas. Oriented soft DNA curtains for single-molecule imaging // Langmuir. Washington : American Chemical Society. ISSN 0743-7463. eISSN 1520-5827. 2021, vol. 37, iss. 11, p. 3428-3437. DOI: 10.1021/acs.langmuir.1c00066. [DB: Science Citation Index Expanded (Web of Science), Scopus] [IF: 4.331; AIF: 7.312; Q2 (2021 InCities JCR SCIE)]
7 Tutkus, Marijonas; Chmeliov, Jevgenij; Trinkūnas, Gediminas; Akhtar, Parveen; Lambrev, Petar H.; Valkūnas, Leonas. Aggregation-related quenching of LHCII fluorescence in liposomes revealed by single-molecule spectroscopy // Journal of photochemistry and photobiology B: Biology. Lausanne : Elsevier Science. ISSN 1011-1344. 2021, vol. 218, art. no. 112174, p. 1-7. DOI: 10.1016/j.jphotobiol.2021.112174. [DB: Science Citation Index Expanded (Web of Science), Scopus, Embase, Chemical abstracts] [IF: 6.814; AIF: 5.561; Q1 (2021 InCities JCR SCIE)]

2017
1 Tutkus, Marijonas; Karzaitė, Giedrė; Ivanovaitė, Šarūnė; Marčiulionis, Tomas; Rutkauskas, Danielis; Zaremba, Mindaugas. Pavienių molekulių fluorescencinė ir FRET mikroskopija DNR ir baltymų sąveikos tyrimams = Single-molecule fluorescence and FRET microscopy for DNA - protein interaction studies // 42-oji Lietuvos nacionalinė fizikos konferencija, 2017 m. spalio 4-6 d., Vilnius : programa ir pranešimų tezės / Vilniaus universitetas; Fizinių ir technologijos mokslų centras; Kauno technologijos universitetas; Lietuvos fizikų draugija. Vilnius : Vilniaus universitetas, 2017. ISBN 9786094598807. p. 77. DOI: 10.15388/proceedings/LNFK.42.
2 Tutkus, Marijonas; Karzaitė, Giedrė; Ivanovaitė, Šarūnė; Marčiulionis, Tomas; Rutkauskas, Danielis; Zaremba, Mindaugas. Pavienių molekulių fluorescencijos mikroskopija DNR sąveikos su BfiI restriktazėmis tyrimuose // 42-oji Lietuvos nacionalinė fizikos konferencija : 2017 m. spalio 4-6 d., Vilnius : programa ir pranešimų tezės / Vilniaus universitetas. Fizinių ir technologijos mokslų centras. Kauno technologijos universitetas. Lietuvos fizikų draugija. Vilnius : Vilniaus universitetas, 2017. ISBN 9786094598807. p. 302. DOI: 10.15388/proceedings/LNFK.42.

2016
1 Tutkus, Marijonas. Revealing parallel and anti-parallel DNA loop dynamics by simultaneous monitoring of FRET and TFM in evanescent field // Swiss NanoConvention 2016 : Swiss, Basel, 30 June - 1 July, 2016 : program. Basel. 2016, p. 1.